Fri Jul 1 07:25:24 2011
Norosx52:
/Users/brandenb/pencil-code/samples/no-modules: (1/35)
Compiling.. [double] ok 00:59
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:00
Validating results.. ok
Time used: 01:00 = 00:59 + 00:00
/Users/brandenb/pencil-code/samples/most-modules: (2/35)
Compiling.. ok 02:59
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:05
Running.. not ok: 00:00
1 CPUs
USER = brandenb
hn = norosx52.albanova.se
Setting nodelist to (norosx52.albanova.se)
1 nodes, 1 CPU(s) per node
Generic setup; hostname is
Non-MPI version
datadir = data
Setting nodelist to node norosx52.albanova.se
$mpi = <0>
$ncpus = <1>
$npops = <>
$local_disc = <0>
$one_local_disc = <1>
$remote_top = <0>
$local_binary = <0>
$datadir =
$SCRATCH_DIR =
$hn =
$masterhost = <>
$mpirun = <>
$mpirunops = <>
$mpirunops2 = <>
$x_ops = <>
$NODELIST =
$SSH =
$SCP =
$PARENT_PID = <61941>
$copysnapshots =
$particles = <1>
$particles_nbody= <1>
Fri Jul 1 07:24:42 CEST 2011
src/run.x
STOP 1
SVN: run.f90 v. 16806 (2011-05-04 15:52:49) dhruba.mitra
SVN: run.in v. 16296 (2011-02-15 09:59:26) fred.gent.ncl
SVN: io_dist.f90 v. 13749 (2010-04-25 20:34:51) sven.bingert
SVN: noinitial_conditio v. 16806 (2011-05-04 15:52:49) dhruba.mitra
SVN: eos_ionization.f90 v. 16747 (2011-04-22 10:39:56) juliensavre
SVN: viscosity.f90 v. 17123 (2011-06-28 13:42:44) sven.bingert
SVN: hydro.f90 v. 17124 (2011-06-29 04:13:59) ccyang
SVN: gravity_simple.f90 v. 16813 (2011-05-05 18:44:55) wladimir.lyra
SVN: selfgravity.f90 v. 16614 (2011-03-31 09:31:42) anders
SVN: density.f90 v. 17124 (2011-06-29 04:13:59) ccyang
SVN: forcing.f90 v. 17100 (2011-06-22 15:15:51) tavo.buk
SVN: entropy.f90 v. 17134 (2011-06-30 04:21:04) ccyang
SVN: magnetic.f90 v. 17130 (2011-06-29 16:09:07) AxelBrandenburg
SVN: nolorenz_gauge.f90 v. 13864 (2010-05-11 14:25:58) sven.bingert
SVN: nopolymer.f90 v. 16364 (2011-02-23 10:03:56) Bourdin.KIS
SVN: testfield.f90 v. 14785 (2010-08-08 21:32:38) AxelBrandenburg
SVN: radiation_ray.f90 v. 17110 (2011-06-25 07:34:25) sven.bingert
SVN: pscalar.f90 v. 16532 (2011-03-18 13:02:40) NBabkovskaia
SVN: chiral.f90 v. 14602 (2010-08-01 02:22:17) AxelBrandenburg
SVN: dustvelocity.f90 v. 16701 (2011-04-17 19:07:54) anders
SVN: dustdensity.f90 v. 17098 (2011-06-22 10:23:29) dhruba.mitra
SVN: noneutralvelocity. v. 14479 (2010-07-29 10:36:22) anders
SVN: noneutraldensity.f v. 14492 (2010-07-29 12:01:09) anders
SVN: cosmicray.f90 v. 14492 (2010-07-29 12:01:09) anders
SVN: cosmicrayflux.f90 v. 14859 (2010-08-14 14:58:40) fred.gent.ncl
SVN: interstellar.f90 v. 17113 (2011-06-25 19:31:42) sven.bingert
SVN: shear.f90 v. 17112 (2011-06-25 15:54:36) AxelBrandenburg
SVN: meanfield_alpm.f90 v. 16589 (2011-03-29 06:53:53) AxelBrandenburg
SVN: particles_dust.f90 v. 17048 (2011-06-11 16:41:47) anders
SVN: particles_radius.f v. 16712 (2011-04-19 06:33:16) wladimir.lyra
SVN: particles_number.f v. 16779 (2011-04-28 19:54:58) sven.bingert
SVN: particles_selfgrav v. 16802 (2011-05-04 12:46:47) sven.bingert
SVN: particles_nbody.f9 v. 16643 (2011-04-08 21:58:17) wladimir.lyra
The verbose level is ip= 14 (ldebug= F )
Reading print formats from print.in
allocate_fnames : allocated memory for cname with nname = 15
allocate_fnames : allocated memory for fname with nname = 15
allocate_fnames : allocated memory for cform with nname = 15
This is a 3-D run
nxgrid, nygrid, nzgrid= 32 32 32
Lx, Ly, Lz= 6.2831855 6.2831855 6.2831855
Vbox= 248.05023
input_persistent_interstellar: 0. 0.
input_persistent_interstellar: 0. 0.
input_persistent_interstellar: 0. 0.
input_persistent_interstellar: 0. 0.
input_persistent_interstellar: 0. 0.
input_persistent_forcing: 0. 0. 0. -10.
input_persistent_interstellar: 0. 0.
input_persistent_forcing: 0. 0. 0. -10.
input_persistent_interstellar: 0. 0.
input_persistent_forcing: 0. 0. 0. -10.
input_persistent_magnetic: 0.
input_persistent_interstellar: 0. 0.
input_persistent_forcing: 0. 0. 0. -10.
input_persistent_magnetic: 0.
read_runpars: slice_position = p
read_runpars: ix,iy,iz,iz2 (video files) = -1 -1 -1 -1
units_general: unit_velocity= 100000.
units_general: unit_density= 1.0000000000000001E-24
units_general: unit_length= 3.1599999999999995E+21
units_general: unit_magnetic= 3.544907808303833
(x,y,z)(point)= -0.09817477 -0.09817477 -0.09817477
(x,y,z)(point2)= -2.0616703 -2.0616703 -2.0616703
TIMEAVG: defaulting idx no. 1 to 1
TIMEAVG: defaulting idx no. 2 to 2
TIMEAVG: defaulting idx no. 3 to 3
TIMEAVG: defaulting idx no. 4 to 4
TIMEAVG: defaulting idx no. 5 to 5
TIMEAVG: defaulting idx no. 6 to 6
TIMEAVG: defaulting idx no. 7 to 7
TIMEAVG: defaulting idx no. 8 to 8
initialize_eos: ENTER
initialize_gravity: no x-gravity
initialize_gravity: no y-gravity
initialize_gravity: constant gravz= 0.
diffusion: nothing
WARNING!
inconsistency between the density constants from eos
(rho0 or lnrho0) and the ones from the density module
(rho_const or lnrho_const). It may damage your
simulation if you are using them in different places.
WARNING: initialize_density:
forcing_cont: ABC--calc sinx, cosx, etc
initialize_entropy: cs2top,cs2cool= 3.9085E+37 0.
initialize_entropy: now set cs2cool=cs2top
initialize_entropy: nheatc_max,iheatcond= 4 nothing nothing nothing nothing
heat conduction: nothing
resistivity: constant eta
WARNING: initialize_magnetic: Resistivity coefficient eta is zero!
initialize_dustdensity: ldustcoagulation,ldustcondensation = F F
advec_ddensity: plain vanila scheme
dust diffusion: nothing
gammacr1= 0.33333337
initialize_interstellar: t_next_SNI 0.
initialize_interstellar: unit_Lambda 3.1645569620253165E+17
initialize_interstellar: default RB cooling fct
initialize_interstellar: solar_mass (code) = 6.30338E-8
initialize_interstellar: ampl_SN, kampl_SN = 3.1691206 0.
initialize_interstellar: t_interval_SNI = 0.000006031239 6.2831855 6.2831855 4199.849
initialize_interstellar: t_next_SNI, t_next_SNII= 0. 0.
initialize_shock: prenormalised shock_factor sum= 1.
FATAL ERROR: initialize_special:: cannot get shared var meanfield_etat
0.142u 0.045s 0:00.21 85.7% 0+0k 0+0io 0pf+0w
Fri Jul 1 07:24:43 CEST 2011
Done
/Users/brandenb/pencil-code/samples/backwards-compatible: (3/35)
Compiling.. ok 01:49
Starting.. ok 00:00
Running.. ok 00:00
Validating results.. ok
Time used: 01:50 = 01:49 + 00:00
/Users/brandenb/pencil-code/samples/2d-tests/selfgravitating-shearwave: (4/35)
Compiling.. ok 01:39
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:02
Validating results.. ok
Time used: 01:43 = 01:39 + 00:04
/Users/brandenb/pencil-code/samples/2d-tests/chemistry_GrayScott: (5/35)
Compiling.. ok 01:29
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:05
Validating results.. ok
Time used: 01:35 = 01:29 + 00:06
/Users/brandenb/pencil-code/samples/0d-tests/heating_ionize: (6/35)
Compiling.. [double] ok 01:24
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 03:05
Validating results.. ok
Time used: 04:30 = 01:24 + 03:06
/Users/brandenb/pencil-code/samples/dust-vortex: (7/35)
Compiling.. ok 01:55
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:32
Validating results.. ok
Time used: 02:28 = 01:55 + 00:33
/Users/brandenb/pencil-code/samples/0d-tests/heating_noionize: (8/35)
Compiling.. ok 01:22
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:00
Validating results.. ok
Time used: 01:23 = 01:22 + 00:00
/Users/brandenb/pencil-code/samples/1d-tests/H2_flamespeed: (9/35)
Compiling.. ok 01:56
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:09
Validating results.. ok
Time used: 02:07 = 01:56 + 00:10
/Users/brandenb/pencil-code/samples/chiral-diffusion: (10/35)
Compiling.. ok 01:13
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:00
Validating results.. ok
Time used: 01:13 = 01:13 + 00:00
/Users/brandenb/pencil-code/samples/cosmicray: (11/35)
Compiling.. ok 01:41
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:00
Validating results.. ok
Time used: 01:41 = 01:41 + 00:00
/Users/brandenb/pencil-code/samples/1d-tests/sod_10: (12/35)
Compiling.. ok 01:34
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:02
Validating results.. ok
Time used: 01:37 = 01:34 + 00:02
/Users/brandenb/pencil-code/samples/1d-tests/ambipolar_diffusion: (13/35)
Compiling.. ok 01:41
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:07
Validating results.. ok
Time used: 01:48 = 01:41 + 00:07
/Users/brandenb/pencil-code/samples/helical-MHDturb: (14/35)
Compiling.. ok 02:14
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 01:15
Validating results.. ok
Time used: 03:30 = 02:14 + 01:15
/Users/brandenb/pencil-code/samples/testfield_z: (15/35)
Compiling.. ok 01:42
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:31
Validating results.. ok
Time used: 02:14 = 01:42 + 00:31
/Users/brandenb/pencil-code/samples/random_uu_particles: (16/35)
Compiling.. ok 01:53
Starting.. ok 00:00
Running.. ok 02:47
Validating results.. ok
Time used: 04:41 = 01:53 + 02:48
/Users/brandenb/pencil-code/samples/1d-tests/solar-atmosphere-temperature: (17/35)
Compiling.. [double] ok 01:24
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:18
Validating results.. ok
Time used: 01:43 = 01:24 + 00:19
/Users/brandenb/pencil-code/samples/kin-dynamo: (18/35)
Compiling.. ok 01:29
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:12
Validating results.. ok
Time used: 01:42 = 01:29 + 00:12
/Users/brandenb/pencil-code/samples/meissner: (19/35)
Compiling.. [double] ok 02:02
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:20
Validating results.. ok
Time used: 02:23 = 02:02 + 00:20
/Users/brandenb/pencil-code/samples/conv-slab-noequi: (20/35)
Compiling.. ok 01:41
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:29
Validating results.. ok
Time used: 02:11 = 01:41 + 00:29
/Users/brandenb/pencil-code/samples/conv-slab: (21/35)
Compiling.. [double] ok 01:44
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:17
Validating results.. ok
Time used: 02:04 = 01:44 + 00:19
/Users/brandenb/pencil-code/samples/2d-tests/globaldisc: (22/35)
Compiling.. ok 01:47
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:38
Validating results.. ok
Time used: 02:27 = 01:47 + 00:40
/Users/brandenb/pencil-code/samples/2d-tests/cylindrical_gdisk: (23/35)
Compiling.. ok 01:33
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:00
Validating results.. ok
Time used: 01:34 = 01:33 + 00:00
/Users/brandenb/pencil-code/samples/0d-tests/solar_system: (24/35)
Compiling.. ok 01:21
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:02
Validating results.. ok
Time used: 01:25 = 01:21 + 00:03
/Users/brandenb/pencil-code/samples/mdwarf: (25/35)
Compiling.. ok 02:08
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:54
Validating results.. ok
Time used: 03:03 = 02:08 + 00:55
/Users/brandenb/pencil-code/samples/sedimentation: (26/35)
Compiling.. ok 02:01
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:25
Validating results.. ok
Time used: 02:28 = 02:01 + 00:26
/Users/brandenb/pencil-code/samples/MRI-turbulence_hyper: (27/35)
Compiling.. [double] ok 02:06
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:11
Validating results.. ok
Time used: 02:19 = 02:06 + 00:12
/Users/brandenb/pencil-code/samples/dust_turb_globaldisk: (28/35)
Compiling.. ok 02:27
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:02
Running.. ok 00:39
Validating results.. ok
Time used: 03:09 = 02:27 + 00:41
/Users/brandenb/pencil-code/samples/geodynamo: (29/35)
Compiling.. ok 02:16
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:51
Validating results.. ok
Time used: 03:09 = 02:16 + 00:52
/Users/brandenb/pencil-code/samples/2d-tests/cylinder_deposition: (30/35)
Compiling.. ok 02:04
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:10
Validating results.. ok
Time used: 02:15 = 02:04 + 00:11
/Users/brandenb/pencil-code/samples/2d-tests/selfgravdisk-deadzone-dust: (31/35)
Compiling.. ok 02:05
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:03
Validating results.. ok
Time used: 02:11 = 02:05 + 00:05
/Users/brandenb/pencil-code/samples/2d-tests/spherical_viscous_ring: (32/35)
Compiling.. ok 01:37
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:00
Running.. ok 00:04
Validating results.. ok
Time used: 01:42 = 01:37 + 00:04
/Users/brandenb/pencil-code/samples/2d-tests/field-loop-fargo: (33/35)
Compiling.. ok 01:55
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:02
Validating results.. ok
Time used: 02:00 = 01:55 + 00:04
/Users/brandenb/pencil-code/samples/baroclinic: (34/35)
Compiling.. ok 01:48
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. ok 00:01
Running.. ok 00:11
Validating results.. ok
Time used: 02:01 = 01:48 + 00:13
/Users/brandenb/pencil-code/samples/1d-tests/sedimentation-noneq-blocks: (35/35)
Compiling.. ok 01:45
No data directory; generating data -> /tmp/pencil-tmp-brandenb-58172
Starting.. not ok: 00:01
/Users/brandenb/pencil-code/samples/1d-tests/sedimentation-noneq-blocks
2 CPUs
USER = brandenb
hn = norosx52.albanova.se
Running under MPI
Setting nodelist to (norosx52.albanova.se)
1 nodes, 2 CPU(s) per node
Generic setup; hostname is
Use mpirun
datadir = data
Setting nodelist to node norosx52.albanova.se
$mpi = <1>
$ncpus = <2>
$npops = <-np 2>
$local_disc = <0>
$one_local_disc = <1>
$remote_top = <0>
$local_binary = <0>
$datadir =
$SCRATCH_DIR =
$hn =
$masterhost = <>
$mpirun =
$mpirunops = <>
$mpirunops2 = <>
$x_ops = <>
$NODELIST =
$SSH =
$SCP =
$PARENT_PID = <25861>
$copysnapshots =
$particles = <1>
$particles_nbody= <0>
Fri Jul 1 08:38:53 CEST 2011
mpirun -np 2 src/start.x
SVN: start.f90 v. 16965 (2011-05-27 19:02:53) AxelBrandenburg
-----BEGIN sample namelist ------
&init_pars /
&eos_init_pars /
&hydro_init_pars /
&density_init_pars /
&grav_init_pars /
&entropy_init_pars /
&particles_init_pars_wrap /
------END sample namelist -------
Found error in input namelist "grav_init_pars"
iostat = 208
-- use sample above.
FATAL ERROR: :
STOP 1
STOP 1
0.055u 0.159s 0:01.18 16.9% 0+0k 0+8io 0pf+0w
Fri Jul 1 08:38:54 CEST 2011
Error status 1 found -- aborting
Time used: undef = 01:45 + undef
----------------------------------------------------------------------
### auto-test failed ###
Failed 2 test(s) out of 35:
/Users/brandenb/pencil-code/samples/1d-tests/sedimentation-noneq-blocks (starting)
/Users/brandenb/pencil-code/samples/most-modules (running)
CPU time (including compilation): 01:20:47u 03:09s
Total wall-clock time: 01:18:16 = 01:03:00 + 15:08
Maintainers of failed tests: anders/astro:lu:se,wlyra/amnh:org,nbabkovskaia/gmail:com,tobias:heinemann/gmail:com,dhruba:mitra/gmail:com,Nils:E:Haugen/sintef:no,juliensavre/gmail:com,dintrans/ast:obs-mip:fr,wdobler/gmail:com,bourdin/mps:mpg:de,bingert/mps:mpg:de,brandenb/nordita:org,mreinhardt/nordita:org
Fri Jul 1 08:43:55 2011